7.4: Nucleophilic Acyl Substitution Reactions of Carboxylic Acids
After completing this section, you should be able to
-
write an equation to describe the formation of
- an acid chloride from a carboxylic acid.
- an ester from a carboxylic acid.
- an amide from a carboxylic acid.
- an alcohol from carboxylic acid.
- write an equation to represent the formation of a cyclic anhydride from a dicarboxylic acid.
- write the detailed mechanism for the reaction of a carboxylic acid with thionyl chloride.
- identify the reagents necessary to convert a given carboxylic acid to a given acid chloride, ester, amide or alcohol.
- identify the carboxylic acid required for a direct synthesis of a given acid chloride, amide, ester or alcohol.
- write an equation to describe the formation of an ester through the nucleophilic attack of a carboxylate anion on an alkyl halide.
- write a detailed mechanism for the Fischer esterification reaction.
- describe the evidence from isotopic labelling experiments that is commonly cited to support the generally accepted mechanism of the Fischer esterification reaction.
- explain why the direct conversion of a carboxylic acid to an amide can only be achieved with difficulty and at a high temperature.
Make certain that you can define, and use in context, the key term below.
- Fischer esterfication reaction
If necessary, review the S N 2 reaction between a carboxylate anion and a primary alkyl halide (Sections 11.2 and 11.3).
You should recall that the oxygen‑18 isotope, 18 O, has a nucleus containing eight protons and ten neutrons. Because it is non‑radioactive, 18 O can be safely employed in the investigation of reaction mechanisms.
The poor leaving group ability of -OH makes carboxylic acids relatively unreactive towards nucleophilic acyl substitutions. The addition of a strong acid protonates the carbonyl oxygen making the carbonyl carbon more electrophilic and circumventing this problem. Also, the substitution reaction can be promoted by converting -OH into a better leaving group. Despite the lack of reactivity, under the right conditions carboxylic acids can be successfully converted into acid chlorides, acid anhydrides, esters, and amides through nucleophilic acyl substitution.
Conversion of Carboxylic acids to Acid Chlorides
Carboxylic acids can be converted to acid chlorides by reaction with thionyl chloride (SOCl 2 ). During the reaction with thionyl chloride, the hydroxyl group of the carboxylic acid is converted to an acyl chlorosulfite moiety which is a better leaving group. During the reaction a nucleophilic chloride anion is produced which reacts with the acyl chlorosulfite intermediate through nucleophilic acyl substitution to produce an acid halide.
General Reaction
Example
Mechanism
The O=S-Cl bonds of thionyl chloride are analogous to the O=C-Cl bonds of an acid halide in that they can undergo a type of nuleophilicy acyl substitution. During the first step of the mechanism, the carboxylic acid reactant acts as a nucleophile and attacks the electrophilic sulfur of thionyl chloride, pushing the pi electrons of the S=O bond onto oxygen. Reforming the S=O bond and eliminating a cloride anion (Cl - ) as a leaving group creates a protonated acyl chlorosulfite. The chlorosulfite group represents an excellent leaving group due to its ability to stabilize a negative charge. The carbonyl of the protonated acyl chlorosulfite intermediate is activated to nucleophilic attack, and promptly reacts with the nucleophilic chloride anion created during the second step of the mechanism to produce a tetrahedral alkoide intermediate. Subsequent reforming of the protonated carbonyl bond eliminates the chlorosulfite group as sulfurdioxide (SO 2 ) and a chloride anion. Lastly, the chloride anion deprotonates the carbonyl to form the acid chloride product.
| 1) Nucleophilic attack on S=O bond | |
| 2) Removal of Cl leaving group | |
| 3) Nucleophilic attack on the carbonyl | |
| 4) Leaving group removal | |
| 5) Deprotonation |
Conversion of Carboxylic Acids into Acid Anhydrides
An acid anhydride (or just anhydride) is the product of condensation of two carboxylic acid molecules with the release of a water molecule. The most common anhydride in organic chemistry is acetic anhydride, due to the high temperatures needed to remove water.
General Reaction
Example
Conversion of Carboxylic Acids into Esters
Nucleophilic Alkylation
Carboxylic acids can be easily converted into their conjugate bases through deprotonation with a base, such as sodium hydroxide. The resulting carboxylate can be alkylated using by an S N 2 reaction with either a methyl or primary halide. If a methyl ester is required, methyl iodide (CH 3 I) is a commonly used reagent.
Example
The Fischer Esterification
Alcohols can be used as nucleophiles to convert carboxylic acids to esters. Due to the poor leaving group ability of -OH in carboxylic acids, an acid catalyst is required to speed up the reaction. Usually the alcohol starting material is used as the reaction solvent so that it can be present in a large excess. This helps to increase the reaction's yield by pushing reaction equilibrium to the right which can be understood via Le Chatelier's principle.
General Reaction
Example
Mechanism
The mechanism begins with protonation of the carbonyl to increase its electrophilic character. A tetrahedral alkoxide intermediate is formed when the alcohol nucleophile adds to the protonated carbonyl, pushing the carbonyl pi electrons onto the oxygen. A different tetrahedral alkoxide intermediate is created when a proton is then transferred to one of the hydroxides (OH), turning it into a good leaving group. Reforming the protonated carbonyl bond then eliminates water as a leaving group. Finally, deprotonation of the carbonyl by water creates the ester product and regenerates the acid catalyst. All the steps of the mechanism are reversible
| Step 1: Protonation of the carbonyl | |
| Step 2: Nucleophilic attack on the carbonyl | |
| Step 3: Proton transfer | |
| Step 4: Removal of water as a leaving group | |
| Step 5: Deprotonation |
Isotopic Labeling
| Evidence to support the Fischer esterification mechanism comes from isotopic labeling experiments with oxygen-18. If the reaction is carried out with an oxygen-18 labeled alcohol, the isotope is found exclusively in the ester and not the water generated. This shows that the C-OH bond of the carboxylic acid and the H-OR bond of the alcohol that is broken during the reaction. |
Predicting the Products of a Fischer Esterification
How could the following molecule be made using a Fischer Esterification?
Analysis
The key bond formed during a Fischer Esterification is the C-O sigma bond. The target molecule can be separated into the two required starting materials by breaking this bond. The carbonyl carbon fragment gains an –OH to become a carboxylic acid and the oxygen fragment gains an H to become an alcohol. The carboxylic acid and the alcohol are reacted using a strong acid catalyst.
Solution
How might you prepare the following esters from the corresponding acids?
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b. c.
- Answer
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- Acetic acid + 1-butanol
- Butanoic acid + methanol
- Cyclopentanecarboxylic acid + isopropyl alcohol
| If the following molecule is treated with acid catalyst, an intramolecular esterification reaction occurs. What is the structure of the product? ( Intramolecular means within the same molecule.) |
- Answer
-
Direct Conversion of Carboxylic Acids to Amides
The direct reaction of a carboxylic acid with an amine would be expected to be difficult because the basic amine would deprotonate the carboxylic acid to form a stable carboxylate salt. However when the ammonium carboxylate salt is heated to a temperature above 100 o C, water is driven off and an amide is formed. Due to the extreme conditions, this reaction is rarely used. When converting to an amide it is preferred to convert the carboxylic acid to a more reactive form such as an acid chloride first and then convert this molecule to an amide.
General Reaction
Conversion of Carboxylic Acids to Amides using DCC
The formation of amides from carboxylic acids and amines is a reaction of great importance in biochemistry. Proteins are formed through the creating of amide bonds between amino acid residues, so a great deal of research has been performed to find efficient methods. The direct conversion of a carboxylic acids to amides is difficult because amines are basic and tend to convert carboxylic acids to their highly unreactive carboxylates. One solution to this problem is through the use of dialkylcarbodiimides (R-N=C=N-R) coupling reagents, such as dicyclohexylcarbodiimide (DCC) or 1-ethyl-3-(3-dimethylaminopropylcarbodiimide (EDEC).
During a DCC amide coupling, the OH of a carboxylic acid is made into a good leaving group which can then be replaced by an amine during nucleophilic acyl substitution. Using DCC as a coupling reagent, 1 o and 2 o amines can be used to create 2 o and 3 o amides respectfully.
Basic reaction
Predicting the products of DCC Coupling
Example
Mechanism
DCC deprotonates the carboxylic acid to form a carboxylate, which is a better nucleophile. The corresponding protonation of DCC increases the electrophilic character of its C=N imide bond. The caboxylate nucleophile then adds to the imide bond and pushes the C=N pi electrons onto the nitrogen. The amine nucleophile can now add itself to the carbonyl bond as part of a nuleophilic acyl substitution. The DCC coupled oxygen is eliminated as dicyclohexylurea, a good leaving group, to create the amide product.
| Step 1: Deprotonation | |
| Step 2: Nucleophilic attack by the carboxylate | |
| Step 3: Nucleophilic attack by the amine | |
| step 4: Proton transfer | |
| Step 5: Leaving group removal |
Biologic Conversion of Carboxylic Acids
In biological chemistry direct conversion of a carboxylic acid to an acyl derivative by nucleophilic acyl substitution does not occur. Rather, the first conversion is from a carboxylate (the least reactive acyl transfer substrate) to an acyl phosphate (the most reactive acyl transfer substrate). This transformation requires a reaction that we are familiar with: phosphorylation of a carboxylate oxygen with ATP as the phosphate donor.
Note that this is just one of the many ways that ATP is used as a energy storage unit: in order to make a high energy acyl phosphate molecule from a low energy carboxylate, the cell must ‘spend’ the energy of one ATP molecule.
Biosynthesis of Fats
In the biosynthesis of fats, for example, a long-chain carboxylic acid reacts with ATP to give an acyl adenylate, followed by subsequent nucleophilic acyl substitution of a thiol group in coenzyme A to give the corresponding acyl CoA (Figure \(\PageIndex{3}\)). This activation is often accomplished in living organisms by reaction of the acid with adenosine triphosphate (ATP) to give an acyl adenosyl phosphate, or acyl adenylate, a mixed anhydride combining a carboxylic acid and adenosine monophosphate (AMP, also known as adenylic acid).
In the biologically active form of fatty acids, the carboxylate groups have been converted to thioesters using coenzyme A. For example, the activated form of the C 16 fatty acid palmitate is:
Let’s take a look at how this activation takes place, in a reaction catalyzed by an enzyme called acyl CoA synthetase. You already know that carboxylates are not themselves good substrates for acyl substitution reactions, and must be activated. Thus, you might predict that the first step of this reaction requires ATP to make a high-energy acyl phosphate intermediate. In fact, the activated carboxylate in this case is an acyl-AMP, formed in the same way as the acyl-AMP intermediate in the asparagine synthetase reaction:
The activated acyl-AMP intermediate is then attacked by the thiol sulfur of coenzyme A, and the AMP group is expelled to form the fatty acyl CoA.
Note that the first step in Figure \(\PageIndex{3}\)—reaction of the carboxylate with ATP to give an acyl adenylate—is itself a nucleophilic acyl substitution on phosphorus. The carboxylate first adds to a double bond, giving a five-coordinate phosphorus intermediate that expels diphosphate ion as a leaving group.