2.9: Aromatic Heterocycles - Pyridine and Pyrrole
After completing this section, you should be able to
- draw the structure of the common aromatic heterocycles pyridine and pyrrole.
- use the Hückel 4 n + 2 rule to explain the aromaticity of each of pyridine and pyrrole.
- draw a diagram to show the orbitals involved in forming the conjugated six‑pi‑electron systems present in aromatic heterocycles such as pyridine, pyrrole, etc.
Aromatic Heterocycles
Many cyclic compounds have an element other than carbon present in the ring. Cyclic compounds that include one or more elements other than carbon are called a heterocycle. The most common heterocyclic compounds contain carbon along with nitrogen, oxygen, or sulfur. Because some heterocyclic compounds are aromatic, it is important to discuss how the inclusion of non-carbon atoms affects the determination of aromaticity.
Pyridine & Pyrimidine
Pyridine is an example of a six-membered aromatic heterocycle and has an electronic structure similar to benzene. In the bonding picture of pyridine the five carbons and single nitrogen are all sp 2 hybridized. All six of these atoms have a p orbital perpendicular to the plane of the ring and each contains one pi electron which allows the ring to be fully conjugated. This makes the pi electron count for pyridine 6 pi electrons. In much the same fashion as benzene, the 6 pi electrons follow the 4n + 2 rule and completely fill the bonding molecular orbitals which fulfills the electronic requirement for aromaticity. The lone pair electrons on pyridine's nitrogen are contained in a sp 2 orbital that lies in the same plane as the ring and does not overlap with the p orbitals of the ring. The lone pair electrons are not part of the aromatic system and do not affect the p electron count. Pyridine's electrostatic potential map shows that the lone pair electrons, shown in a yellow/red color, are locked onto the nitrogen and not distributed around the ring.
Pyrimidine is an another six-membered aromatic heterocycle that is analogous to pyridine. Pyrimidine has four carbons atoms and two nitrogen atoms that are sp 2 hybridized. Each of these atoms contributes a p orbital and a pi election allowing pyrimidine to be fully conjugated and aromatic. Both of the nitrogens in pyrimidine have lone pair electrons contained in a sp 2 orbitals and are not involved in the aromatic system. An electrostatic potential map of pyrimidine shows that neither set of lone pair electrons is distributed around the ring.
Pyrrole
Pyrrole is a five-membered heterocyclic ring which has 5 p orbitals and six pi electrons contributing to its aromaticity. Each carbon in pyrrole contributes one p orbital and pi electron. The nitrogen in pyrrole contributes two pi electrons by becoming sp 2 hybridized and placing its lone pair electrons into a p orbital. The electrostatic potential map of pyrrole show the nitrogen's lone pair electrons are distributed in the ring. Because the nitrogen lone pair is part of the aromatic sextet the electrons are very stable and are much less available for bonding to a proton (and if they do pick up a proton, the molecule loses aromaticity). Pyrrole is a very weak base: the conjugate acid, the pyrrolium ion, is a strong acid with a pK a of 0.4.
Imidazole
Imidazole is another five-membered heterocyclic ring which has 6 pi electrons and is aromatic. Both of the nitrogen atoms are sp 2 hybridized. One nitrogen is pyridine-like because it is part of a double bond and adds one pi electron to the aromatic pi ring. The other nitrogen is not part of a double bond making it pyrrole-like allowing it to contribute 2 pi electrons from it lone pair electrons. When looking at the electrostatic potential map of imidazole, the lone pair electrons on the pyrrole-like nitrogen are distributed around the ring while the lone pair electrons on the pyridine-like nitrogen are non-conjugated and locked into place.
Pyrimidine and imidazole rings are particularly important in biological chemistry. Pyrimidine, for instance, is the parent ring system in cytosine, thymine, and uracil, three of the five heterocyclic amine bases found in nucleic acids. An aromatic imidazole ring is present in histidine, one of the
Determine if furan is aromatic. Draw an orbital diagram to support your answer.
- Answer
- For a molecule to be aromatic it must: Be cyclic, be planar, be fully conjugated , and have 4n+2 π electrons.
- Furan is obviously cyclic and can be assumed to be planar due to the constrains of having a five membered ring with two double bonds. To be fully conjugated each atom in the ring must have a p orbital. Although the oxygen has 4 electron groups and appears to be sp 3 hybridized, it will become sp 2 hybridized to gain the stability of conjugation. Becoming sp 2 hybridized allows the oxygen atom to put a set of lone pair electrons into a p orbital allowing it to be part of the cyclic conjugation. These two pi electrons along with the 4 pi electrons provided by the two double bonds gives furan 6 pi electrons total. This follows the 4n + 2 rule making furan aromatic.
Exercises
1) Draw the orbitals of thiophene to show that it is aromatic.
2) The thiazolium ring is a five-membered sulfur containing aromatic ring system which is found in biological systems, such as thiamine diphosphate (ThDP). Describe how thiazolium ring is aromatic.
- Answer
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1) This drawing shows thiophene has 6 electrons in the pi-orbital.
2) Similar to the last question, the drawing shows that there is only 6 electrons in the pi-system.
Draw the orbitals of thiophene to show that is aromatic.
- Answer
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This drawing shows it has 6 electrons in the pi-orbital.
The following ring is called a thiazolium ring. Describe how it is aromatic.
- Answer
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Similar to the last question, the drawing shows that there is only 6 electrons in the pi-system.